STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ypel5Yippee like 5. (121 aa)    
Predicted Functional Partners:
LOC114644745
Armadillo repeat-containing protein 8-like.
    
 0.992
gid8
GID complex subunit 8 homolog.
   
 
 0.976
wdr26
WD repeat domain 26.
   
 
 0.968
ranbp10
RAN binding protein 10.
   
 
 0.949
maea
Macrophage erythroblast attacher.
    
 
 0.944
ranbp9
RAN binding protein 9.
   
 
 0.941
rmnd5b
Required for meiotic nuclear division 5 homolog B.
    
 
 0.933
rmnd5a
Required for meiotic nuclear division 5 homolog A.
    
 
 0.925
mkln1
Muskelin 1.
    
 
 0.819
LOC114650663
Protein FAM162B-like.
      
 0.795
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.