STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000002007annotation not available (587 aa)    
Predicted Functional Partners:
mtres1
Mitochondrial transcription rescue factor 1.
      
 0.633
sec63
SEC63 homolog, protein translocation regulator.
      
 0.605
sobp
Sine oculis binding protein homolog.
      
 0.597
cryl1
Crystallin lambda 1.
      
 0.487
ostm1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.449
pdss2
Decaprenyl diphosphate synthase subunit 2.
      
 0.449
bend3
BEN domain containing 3.
      
 0.449
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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