STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
map3k5Mitogen-activated protein kinase kinase kinase 5. (1308 aa)    
Predicted Functional Partners:
daxx
Death domain associated protein.
    
 0.961
map2k4
Mitogen-activated protein kinase kinase 4.
   
0.951
LOC114664925
Dual specificity mitogen-activated protein kinase kinase 6.
   
0.941
traf2
TNF receptor associated factor 2.
    
 0.937
LOC114657073
TNF receptor-associated factor 2-like.
    
 0.937
map2k3
Mitogen-activated protein kinase kinase 3.
   
0.935
ern1
Endoplasmic reticulum to nucleus signaling 1.
   
0.923
dab2ip
DAB2 interacting protein.
    
 0.901
park7
Parkinsonism associated deglycase.
    
 0.898
traf4
TNF receptor associated factor 4.
    
 0.897
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.