STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bmxBMX non-receptor tyrosine kinase. (584 aa)    
Predicted Functional Partners:
ENSECRP00000011256
annotation not available
    
 0.904
lcp2
Lymphocyte cytosolic protein 2.
  
 0.859
blnk
B cell linker.
   
 0.858
met
MET proto-oncogene, receptor tyrosine kinase.
    
0.775
ENSECRP00000022943
annotation not available
    
0.775
syk
Spleen associated tyrosine kinase.
  
0.736
cd247
CD247 molecule.
   
 0.735
LOC114662923
Tyrosine-protein kinase ZAP-70.
  
0.732
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 
0.729
grap2
GRB2 related adaptor protein 2.
   
 0.717
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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