STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gas2l1Growth arrest specific 2 like 1. (941 aa)    
Predicted Functional Partners:
mapre1
Microtubule associated protein RP/EB family member 1.
    
 
 0.842
mapre3
Microtubule associated protein RP/EB family member 3.
    
   0.701
mapre2
Microtubule associated protein RP/EB family member 2.
    
   0.701
ENSECRP00000017349
annotation not available
   
 
 0.638
mrps5
Mitochondrial ribosomal protein S5.
      
 0.630
eny2
ENY2 transcription and export complex 2 subunit.
    
 0.594
cntf
Ciliary neurotrophic factor.
    
 0.591
rasl10b
RAS like family 10 member B.
    
 0.583
zmat5
Zinc finger matrin-type 5.
    
 
 0.571
tada3
Transcriptional adaptor 3.
    
 0.550
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.