STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plgPlasminogen. (809 aa)    
Predicted Functional Partners:
fga
Fibrinogen alpha chain.
   
 0.986
fgb
Fibrinogen beta chain.
   
 0.980
serpinf2
Serpin family F member 2.
  
 0.966
serpinc1
Serpin family C member 1.
  
 0.966
serpind1
Serpin family D member 1.
  
 0.963
apoh
Apolipoprotein H.
   
 0.945
ahsg
Alpha 2-HS glycoprotein.
   
 0.929
fgg
Fibrinogen gamma chain.
   
 0.929
hgfac
HGF activator.
   
0.923
ambp
Alpha-1-microglobulin/bikunin precursor.
   
  0.919
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.