STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dop1bDOP1 leucine zipper like protein B. (2284 aa)    
Predicted Functional Partners:
mon2
MON2 homolog, regulator of endosome-to-Golgi trafficking.
   
 
 0.955
LOC114658097
PQ-loop repeat-containing protein 1-like.
    
 
 0.549
slc66a2
Solute carrier family 66 member 2.
    
 
 0.549
atp9a
ATPase phospholipid transporting 9A (putative).
   
 
 0.439
ccdc103
Coiled-coil domain containing 103.
   
 
 0.439
atp9b
ATPase phospholipid transporting 9B (putative).
   
 
 0.439
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.