STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114642157Interferon-induced transmembrane protein 5-like. (141 aa)    
Predicted Functional Partners:
serpinf1
Serpin family F member 1.
    
 0.626
ctsw
Cathepsin W.
   
 0.605
ctso
Cathepsin O.
   
 0.605
fkbp10
FKBP prolyl isomerase 10.
    
 
 0.526
atp6ap2
ATPase H+ transporting accessory protein 2.
   
 0.525
psap
Prosaposin.
   
 0.524
ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.523
tmem38b
Transmembrane protein 38B.
      
 0.504
serpinh1
Serpin family H member 1.
    
 0.480
p3h1
Prolyl 3-hydroxylase 1.
      
 0.461
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.