STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114649297Transcriptional enhancer factor TEF-5-like. (474 aa)    
Predicted Functional Partners:
yap1
Yes associated protein 1.
   
 0.954
wwtr1
WW domain containing transcription regulator 1.
   
 0.952
vgll4
Vestigial like family member 4.
    
 
 0.871
tcf7
Transcription factor 7.
    
  0.831
lef1
Lymphoid enhancer binding factor 1.
    
  0.831
LOC114660606
Transcription cofactor vestigial-like protein 4.
    
 
 0.724
tcf7l1
Transcription factor 7 like 1.
    
  0.714
tcf7l2
Transcription factor 7 like 2.
    
  0.714
insm1
INSM transcriptional repressor 1.
    
 
 0.683
LOC114667086
Insulinoma-associated protein 2-like.
    
 
 0.683
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.