STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcc2ATP binding cassette subfamily C member 2. (1553 aa)    
Predicted Functional Partners:
ENSECRP00000019819
annotation not available
    
  0.844
ENSECRP00000033615
annotation not available
 
      0.820
LOC114645640
ATP-binding cassette sub-family G member 2-like.
  
0.818
abcg2
ATP binding cassette subfamily G member 2 (Junior blood group).
  
0.818
slc9a3r2
SLC9A3 regulator 2.
   
 0.690
slc9a3r1
SLC9A3 regulator 1.
   
 0.690
katnal2
Katanin catalytic subunit A1 like 2.
  
 0.682
gopc
Golgi associated PDZ and coiled-coil motif containing.
   
 0.660
apob
Apolipoprotein B.
   
 
 0.656
ENSECRP00000000849
annotation not available
  
  0.649
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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