STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csrp2Cysteine and glycine rich protein 2. (194 aa)    
Predicted Functional Partners:
mtus1
Microtubule associated scaffold protein 1.
    
  0.588
LOC114659507
Serine/threonine-protein kinase 4-like.
    
  0.588
stk3
Serine/threonine kinase 3.
    
  0.588
actn3
Actinin alpha 3.
   
 0.465
LOC114667029
Alpha-actinin-1.
   
 0.465
actn2
Actinin alpha 2.
   
 0.465
actn4
Actinin alpha 4.
   
 0.465
myl1
Myosin light chain 1.
   
 
 0.456
LOC114653424
Myosin regulatory light chain 2, smooth muscle minor isoform.
   
 
 0.434
LOC114659546
Myosin regulatory light polypeptide 9.
   
 
 0.434
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.