STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nsd3Nuclear receptor binding SET domain protein 3. (1488 aa)    
Predicted Functional Partners:
dot1l
DOT1 like histone lysine methyltransferase.
    
 0.873
ash1l
ASH1 like histone lysine methyltransferase.
   
 
0.821
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.808
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.807
LOC114642218
Histone-lysine N-methyltransferase SETD2-like.
   
 
0.794
prdm2
PR/SET domain 2.
   
 0.793
kmt2e
Lysine methyltransferase 2E.
   
 0.789
eed
Embryonic ectoderm development.
   
 0.782
cdyl
Chromodomain Y like.
   
 0.748
cdyl2
Chromodomain Y like 2.
   
 0.748
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.