STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tm2d2TM2 domain containing 2. (206 aa)    
Predicted Functional Partners:
piga
Phosphatidylinositol glycan anchor biosynthesis class A.
     
 0.865
ENSECRP00000021023
annotation not available
     
 0.851
pigh
Phosphatidylinositol glycan anchor biosynthesis class H.
   
 
 0.851
pigp
Phosphatidylinositol glycan anchor biosynthesis class P.
   
 
 0.842
pigl
Phosphatidylinositol glycan anchor biosynthesis class L.
     
 0.842
dpm2
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
   
 
  0.733
pigw
Phosphatidylinositol glycan anchor biosynthesis class W.
     
 0.702
drg2
Developmentally regulated GTP binding protein 2.
 
      0.679
tm2d1
TM2 domain containing 1.
   
  
 0.592
nhlrc2
NHL repeat containing 2.
      
 0.568
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.