STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114646059Uncharacterized LOC114646059. (1045 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.963
il16
Interleukin 16.
  
 
 
0.895
LOC114658001
Lymphocyte activation gene 3 protein-like.
    
  0.855
ENSECRP00000006522
annotation not available
    
 0.836
tep1
Telomerase associated protein 1.
   
 0.800
tep1-2
Telomerase associated protein 1.
   
 0.800
glyr1
Glyoxylate reductase 1 homolog.
    
 0.773
bag3
BCL2 associated athanogene 3.
    
 0.766
cdc16
Cell division cycle 16.
    
 0.757
anapc4
Anaphase promoting complex subunit 4.
    
 0.755
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.