STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahcyl2Adenosylhomocysteinase like 2. (598 aa)    
Predicted Functional Partners:
cbs
Cystathionine beta-synthase.
  
 0.917
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.913
cth
Cystathionine gamma-lyase.
  
 0.910
ahcy
Adenosylhomocysteinase.
  
 
0.882
mtr
5-methyltetrahydrofolate-homocysteine methyltransferase.
  
 
 0.876
LOC114650426
Homocysteine S-methyltransferase 1-like.
  
 
 0.875
LOC114654879
Betaine--homocysteine S-methyltransferase 1.
  
 
 0.875
mthfr
Methylenetetrahydrofolate reductase.
  
 
 0.858
ENSECRP00000014469
annotation not available
  
 
 0.853
kyat3
Kynurenine aminotransferase 3.
  
 0.837
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.