STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab11fip2RAB11 family interacting protein 2. (520 aa)    
Predicted Functional Partners:
LOC114646103
Ras-related protein Rab-11A-like.
  
 0.970
LOC114662823
Ras-related protein Rab-11B-like.
  
 0.965
rab8a
RAB11B, member RAS oncogene family.
  
 0.965
LOC114657979
EH domain-containing protein 1.
    
 0.884
rab11fip5
RAB11 family interacting protein 5.
    
0.877
rab25
RAB25, member RAS oncogene family.
  
 0.876
sfxn5
Sideroflexin 5.
 
  
 0.816
myo5c
Myosin VC.
   
 0.770
ENSECRP00000027794
annotation not available
   
 0.770
myo5a
Myosin VA.
   
 0.770
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.