STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2hUbiquitin conjugating enzyme E2 H. (183 aa)    
Predicted Functional Partners:
ube2v1
Ubiquitin conjugating enzyme E2 V1.
     
 0.991
wdr26
WD repeat domain 26.
   
 0.953
mkln1
Muskelin 1.
     
 0.903
uba3
Ubiquitin like modifier activating enzyme 3.
    
 0.889
ENSECRP00000022861
annotation not available
    
 0.879
uba7
Ubiquitin like modifier activating enzyme 7.
    
 0.879
uba6
Ubiquitin like modifier activating enzyme 6.
    
 0.879
ube2w
Ubiquitin conjugating enzyme E2 W.
   
 0.875
ube2j1
Ubiquitin conjugating enzyme E2 J1.
   
 0.864
rmnd5b
Required for meiotic nuclear division 5 homolog B.
   
 0.859
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.