STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tomm70Translocase of outer mitochondrial membrane 70. (578 aa)    
Predicted Functional Partners:
tomm20
Translocase of outer mitochondrial membrane 20.
   
 0.998
tomm22
Translocase of outer mitochondrial membrane 22.
   
 0.995
tomm7
Translocase of outer mitochondrial membrane 7.
    
 0.986
samm50
SAMM50 sorting and assembly machinery component.
   
 0.973
LOC114658167
Mitochondrial import receptor subunit TOM40B-like.
    
 0.973
tomm40
Translocase of outer mitochondrial membrane 40.
    
 0.973
ENSECRP00000033031
annotation not available
    
 0.949
ankzf1
Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1.
     
 0.921
LOC114646085
Metaxin-1-like.
    
 0.896
mtx3
Metaxin 3.
    
 0.896
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (18%) [HD]