STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gabra2Gamma-aminobutyric acid type A receptor alpha2 subunit. (445 aa)    
Predicted Functional Partners:
gabrd
Gamma-aminobutyric acid type A receptor delta subunit.
  
0.955
gabrp
Gamma-aminobutyric acid type A receptor pi subunit.
  
0.952
LOC114650037
Gamma-aminobutyric acid receptor subunit rho-3-like.
  
 
 
0.921
gabrg1
Gamma-aminobutyric acid type A receptor gamma1 subunit.
  
0.907
gabrg2
Gamma-aminobutyric acid type A receptor gamma2 subunit.
  
0.905
ENSECRP00000022044
annotation not available
  
0.904
ENSECRP00000022101
annotation not available
  
0.904
gphn
Gephyrin.
    
 0.896
ENSECRP00000023290
annotation not available
  
0.889
gabrb1
Gamma-aminobutyric acid type A receptor beta1 subunit.
  
0.888
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.