STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppm1kProtein phosphatase, Mg2+/Mn2+ dependent 1K. (370 aa)    
Predicted Functional Partners:
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
   
 0.947
dbt
Dihydrolipoamide branched chain transacylase E2.
   
 0.910
bckdha
Branched chain keto acid dehydrogenase E1 subunit alpha.
  
 0.906
med31
Mediator complex subunit 31.
    
  0.772
ENSECRP00000009357
annotation not available
    
  0.767
med14
Mediator complex subunit 14.
    
  0.767
med7
Mediator complex subunit 7.
    
  0.767
med6
Mediator complex subunit 6.
    
  0.745
dld
Dihydrolipoamide dehydrogenase.
  
 0.722
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.710
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.