STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arl3ADP ribosylation factor like GTPase 3. (200 aa)    
Predicted Functional Partners:
unc119
Unc-119 lipid binding chaperone.
    
 0.966
rp2
RP2 activator of ARL3 GTPase.
    
 0.955
itsn2
Intersectin 2.
    
 0.926
pde6d
Phosphodiesterase 6D.
   
 0.916
ENSECRP00000021312
annotation not available
    
 0.897
itsn1
Intersectin 1.
    
 0.893
cfap36
Cilia and flagella associated protein 36.
   
 
 0.889
ENSECRP00000011256
annotation not available
   
 0.831
ENSECRP00000014434
annotation not available
   
 0.822
cabp1
Calcium binding protein 1.
   
 0.822
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.