STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114649300Immunoglobulin-like and fibronectin type III domain-containing protein 1. (1225 aa)    
Predicted Functional Partners:
ENSECRP00000011256
annotation not available
 
 
0.855
wdr18
WD repeat domain 18.
   
 0.787
tex10
Testis expressed 10.
   
 0.760
pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.699
ENSECRP00000011435
annotation not available
 
  
  
0.661
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.654
myl1
Myosin light chain 1.
   
 0.650
rps14
Ribosomal protein S14.
   
  0.613
calml6
Calmodulin like 6.
    
 0.601
myl7
Myosin light chain 7.
    
 0.596
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.