STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114646094Disintegrin and metalloproteinase domain-containing protein 15-like. (953 aa)    
Predicted Functional Partners:
rasa1
RAS p21 protein activator 1.
    
  0.543
lgi2
Leucine rich repeat LGI family member 2.
     
 0.515
sh3pxd2a
SH3 and PX domains 2A.
    
 0.512
sh3pxd2b
SH3 and PX domains 2B.
    
 0.510
epha2
EPH receptor A2.
   
  0.482
efna3
Ephrin A3.
 
   
  0.473
slc4a7
Solute carrier family 4 member 7.
      
 0.463
lgi1
Leucine rich glioma inactivated 1.
     
 0.451
ENSECRP00000012066
annotation not available
    
  0.450
ENSECRP00000012442
annotation not available
    
  0.450
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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