STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stx19Syntaxin 19. (292 aa)    
Predicted Functional Partners:
ENSECRP00000027989
annotation not available
     
 0.981
rims2
Regulating synaptic membrane exocytosis 2.
     
 0.981
vamp7
Vesicle associated membrane protein 7.
    
 0.967
stx16
Syntaxin 16.
    
 0.963
vamp4
Vesicle associated membrane protein 4.
    
 0.962
snap47
Synaptosome associated protein 47.
    
 0.951
stx8
Syntaxin 8.
    
 0.949
snap29
Synaptosome associated protein 29.
    
 0.947
stx5
Syntaxin 5.
    
 0.945
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.938
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.