STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
grxcr1Glutaredoxin and cysteine rich domain containing 1. (293 aa)    
Predicted Functional Partners:
cap2
Cyclase associated actin cytoskeleton regulatory protein 2.
    
   0.783
LOC114664614
Adenylyl cyclase-associated protein 1-like.
    
   0.783
cap1
Cyclase associated actin cytoskeleton regulatory protein 1.
    
   0.783
slc30a9
Solute carrier family 30 member 9.
      
 0.695
glrx
Glutaredoxin.
      
 0.677
pjvk
Pejvakin.
     
 0.674
ush1c
USH1 protein network component harmonin.
     
 0.668
ripor1
RHO family interacting cell polarization regulator 1.
     
 0.645
ripor3
RIPOR family member 3.
     
 0.645
ENSECRP00000031377
annotation not available
     
 0.645
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.