STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r10Protein phosphatase 1 regulatory subunit 10. (777 aa)    
Predicted Functional Partners:
ddx46
DEAD-box helicase 46.
   
 0.986
sf3a1
Splicing factor 3a subunit 1.
   
 0.984
ENSECRP00000022115
annotation not available
   
 0.970
u2af2
U2 small nuclear RNA auxiliary factor 2.
   
 0.970
sf3b1
Splicing factor 3b subunit 1.
   
 0.957
sf3a3
Splicing factor 3a subunit 3.
   
 0.949
sf3a2
Splicing factor 3a subunit 2.
   
 0.924
ENSECRP00000026313
annotation not available
   
 0.924
wac
WW domain containing adaptor with coiled-coil.
    
 0.909
prpf40b
pre-mRNA processing factor 40 homolog B.
    
 0.909
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.