STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flot1Flotillin 1. (428 aa)    
Predicted Functional Partners:
sorbs1
Sorbin and SH3 domain containing 1.
    
 0.900
sorbs2
Sorbin and SH3 domain containing 2.
    
 0.895
flot2
Flotillin 2.
  
  
 
0.848
hspa5
Heat shock protein family A (Hsp70) member 5.
     
 0.821
stoml2
Stomatin like 2.
    
 0.814
cops5
COP9 signalosome subunit 5.
   
  0.804
atp5f1a
ATP synthase F1 subunit alpha.
    
 0.803
cops6
COP9 signalosome subunit 6.
   
  0.790
grb2
Growth factor receptor bound protein 2.
     
 0.779
sorbs3
Sorbin and SH3 domain containing 3.
    
 0.776
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.