STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr1WD repeat domain 1. (607 aa)    
Predicted Functional Partners:
actr3b
Actin related protein 3B.
   
 0.899
actr3
Actin related protein 3.
   
 0.899
capzb
Capping actin protein of muscle Z-line subunit beta.
   
 
 0.884
ENSECRP00000031904
annotation not available
   
 
 0.884
cfl1
Cofilin 1.
   
 
 0.821
cfl2
Cofilin 2.
   
 
 0.821
LOC114666229
Cofilin-2-like.
   
 
 0.821
LOC114649837
Actin, alpha cardiac muscle 1.
   
 0.813
acta2
Actin alpha 2, smooth muscle.
   
 0.813
LOC114648333
Actin, alpha cardiac.
   
 0.813
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.