STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk32bSerine/threonine kinase 32B. (393 aa)    
Predicted Functional Partners:
rptor
Regulatory associated protein of MTOR complex 1.
    
 0.850
pdpk1
3-phosphoinositide dependent protein kinase 1.
    
0.842
mapkap1
MAPK associated protein 1.
    
 0.828
atp5pd
ATP synthase peripheral stalk subunit d.
   
 0.822
kdm6b
Lysine demethylase 6B.
   
 0.819
kdm6a
Lysine demethylase 6A.
   
 0.819
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 0.812
rps6
Ribosomal protein S6.
    
 0.804
atp5f1d
ATP synthase F1 subunit delta.
   
 0.801
atp5po
ATP synthase peripheral stalk subunit OSCP.
   
 0.799
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.