STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpn12Protein tyrosine phosphatase non-receptor type 12. (780 aa)    
Predicted Functional Partners:
csk
C-terminal Src kinase.
   
 0.853
matk
Megakaryocyte-associated tyrosine kinase.
   
 0.851
pstpip1
Proline-serine-threonine phosphatase interacting protein 1.
   
 
 0.778
shc1
SHC adaptor protein 1.
    
 0.775
shc3
SHC adaptor protein 3.
    
 0.775
shc4
SHC adaptor protein 4.
    
 0.741
erbb2
Erb-b2 receptor tyrosine kinase 2.
    
 0.676
grb2
Growth factor receptor bound protein 2.
   
 0.664
cd247
CD247 molecule.
   
 0.661
pstpip2
Proline-serine-threonine phosphatase interacting protein 2.
   
 
 0.654
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.