STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gja3Gap junction protein alpha 3. (421 aa)    
Predicted Functional Partners:
gja1
Gap junction protein alpha 1.
    
0.946
gjc2
Gap junction protein gamma 2.
    
0.942
ENSECRP00000016037
annotation not available
  
 
0.938
ENSECRP00000019037
annotation not available
  
 
 
0.938
gje1
Gap junction protein epsilon 1.
     
0.938
LOC114650882
Gap junction alpha-5 protein-like.
     
0.936
LOC114656141
Gap junction gamma-1 protein-like.
   
 
0.936
ENSECRP00000007017
annotation not available
   
 
 
0.935
LOC114646136
Gap junction delta-2 protein-like.
     
0.934
gjc1
Gap junction protein gamma 1.
   
 
0.934
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.