STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcdc1Doublecortin domain containing 1. (1531 aa)    
Predicted Functional Partners:
LOC114647611
Cytochrome b5 domain-containing protein 1-like.
   
    0.566
LOC114647612
Cytochrome b5 domain-containing protein 1.
   
    0.566
elp4
Elongator acetyltransferase complex subunit 4.
      
 0.557
ENSECRP00000011355
annotation not available
   
    0.450
ENSECRP00000011452
annotation not available
   
    0.450
ENSECRP00000011484
annotation not available
   
    0.450
dnali1
Dynein axonemal light intermediate chain 1.
   
    0.450
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.