STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mphosph8M-phase phosphoprotein 8. (950 aa)    
Predicted Functional Partners:
LOC114659234
DNA (cytosine-5)-methyltransferase 3A-like.
    
 
 0.962
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.940
rb1
RB transcriptional corepressor 1.
   
 0.886
rbl1
RB transcriptional corepressor like 1.
   
 0.886
rbl2
RB transcriptional corepressor like 2.
   
 0.886
sirt1
Sirtuin 1.
   
 0.875
sirt5
Sirtuin 5.
   
 0.875
setd7
SET domain containing 7, histone lysine methyltransferase.
    
 0.838
ezh1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
    
 0.838
ezh2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
    
 0.838
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.