Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
basp1Brain abundant membrane attached signal protein 1. (240 aa)    
Predicted Functional Partners:
cdh18
Cadherin 18.
      
 0.782
trim37
Tripartite motif containing 37.
    
   0.757
atp5f1a
ATP synthase F1 subunit alpha.
    
   0.739
marcks
Myristoylated alanine rich protein kinase C substrate.
     
 0.682
gap43
Growth associated protein 43.
      
 0.659
ENSECRP00000024164
annotation not available
      
 0.658
gaa
Glucosidase alpha, acid.
      
 0.658
bud31
BUD31 homolog.
      
 0.615
taf11
TATA-box binding protein associated factor 11.
      
 0.596
LOC114659682
Rho-related GTP-binding protein RhoF-like.
     
  0.593
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.