STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000006342annotation not available (294 aa)    
Predicted Functional Partners:
birc6
Baculoviral IAP repeat containing 6.
    
 0.845
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.826
rps27a
Ribosomal protein S27a.
    
 0.795
ube2v1
Ubiquitin conjugating enzyme E2 V1.
    
 0.776
tradd
TNFRSF1A associated via death domain.
    
 0.737
zfand4
Zinc finger AN1-type containing 4.
    
 0.717
ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.708
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.691
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.691
ecsit
ECSIT signaling integrator.
    
 0.690
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.