STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenpeCentromere protein E. (3325 aa)    
Predicted Functional Partners:
kif11
Kinesin family member 11.
   
0.995
bub1b
BUB1 mitotic checkpoint serine/threonine kinase B.
   
 0.992
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.988
cenpf
Centromere protein F.
   
 0.985
kif18a
Kinesin family member 18A.
   
0.975
kif4a
Kinesin family member 4A.
   
 
0.964
aspm
Abnormal spindle microtubule assembly.
   
 
 0.962
prc1
Protein regulator of cytokinesis 1.
   
 
 0.958
nuf2
NUF2 component of NDC80 kinetochore complex.
   
 
 0.953
LOC114667207
Kinesin-like protein KIF23.
   
0.951
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.