STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd3Major facilitator superfamily domain containing 3. (430 aa)    
Predicted Functional Partners:
LOC114648548
Cytochrome b5 reductase 4.
   
  0.824
ENSECRP00000004184
annotation not available
    
 0.660
b3galt6
Beta-1,3-galactosyltransferase 6.
     
 0.641
b4galnt1
beta-1,4-N-acetyl-galactosaminyltransferase 1.
     
 0.641
LOC114664579
Beta-1,4 N-acetylgalactosaminyltransferase 2-like.
     
 0.641
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.625
ENSECRP00000014714
annotation not available
   
 0.625
LOC114667591
Glyceraldehyde-3-phosphate dehydrogenase 2.
   
 0.625
tk1
Thymidine kinase 1.
     
 0.606
tyms
Thymidylate synthetase.
    
  0.588
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.