STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114651006Olfactory receptor 2AT4-like. (324 aa)    
Predicted Functional Partners:
gng13
G protein subunit gamma 13.
    
  0.747
gnal
G protein subunit alpha L.
    
  0.666
gnas
GNAS complex locus.
    
  0.666
ENSECRP00000011256
annotation not available
    
  0.634
arrb2
Arrestin beta 2.
    
  0.628
LOC114649976
Beta-arrestin-1.
    
  0.628
sag
S-antigen visual arrestin.
    
  0.628
ENSECRP00000020140
annotation not available
    
  0.628
gnb2
G protein subunit beta 2.
    
  0.607
LOC114646404
Guanine nucleotide-binding protein subunit beta-4.
    
  0.607
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (16%) [HD]