STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mapkapk2MAPK activated protein kinase 2. (400 aa)    
Predicted Functional Partners:
hspb1
Heat shock protein family B (small) member 1.
   
 0.993
mapk11
Mitogen-activated protein kinase 11.
  
 
0.973
LOC114656052
Mitogen-activated protein kinase 12-like.
  
 
0.973
mapk13
Mitogen-activated protein kinase 13.
  
 
0.973
mapk14
Mitogen-activated protein kinase 14.
  
 
0.968
LOC114669065
Mitogen-activated protein kinase 12-like.
  
 
0.968
mapkapk3
MAPK activated protein kinase 3.
  
 
 
0.938
LOC114646943
mRNA decay activator protein ZFP36L1-like.
    
 0.894
ENSECRP00000000942
annotation not available
    
 0.894
zfp36l1
ZFP36 ring finger protein like 1.
    
 0.894
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.