STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114651017Olfactory receptor 52H1-like. (311 aa)    
Predicted Functional Partners:
ENSECRP00000011256
annotation not available
    
  0.634
gnal
G protein subunit alpha L.
    
 0.555
gnas
GNAS complex locus.
    
 0.555
gng13
G protein subunit gamma 13.
    
  0.549
LOC114659191
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like.
    
  0.502
gng7
G protein subunit gamma 7.
    
  0.502
nts
Neurotensin.
    
  0.422
pnoc
Prepronociceptin.
    
  0.415
haus3
HAUS augmin like complex subunit 3.
    
 0.415
haus8
HAUS augmin like complex subunit 8.
    
  0.411
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.