STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
elp3Elongator acetyltransferase complex subunit 3. (451 aa)    
Predicted Functional Partners:
elp4
Elongator acetyltransferase complex subunit 4.
   
 0.999
LOC114654198
Elongator complex protein 1-like.
   
 0.999
elp5
Elongator acetyltransferase complex subunit 5.
   
 0.998
elp2
Elongator acetyltransferase complex subunit 2.
   
 0.998
elp6
Elongator acetyltransferase complex subunit 6.
   
 0.979
kti12
KTI12 chromatin associated homolog.
   
 0.972
nmb
Neuromedin B.
   
 0.972
dph3
Diphthamide biosynthesis 3.
   
 
 0.909
LOC114645993
Unconventional myosin-Ie-like.
    
 0.897
nin
Ninein.
    
 0.897
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.