STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppfibp2PPFIA binding protein 2. (948 aa)    
Predicted Functional Partners:
ppfia4
PTPRF interacting protein alpha 4.
   
0.823
ppfia2
PTPRF interacting protein alpha 2.
   
0.823
ppfia1
PTPRF interacting protein alpha 1.
   
0.823
ppfia3
PTPRF interacting protein alpha 3.
   
0.823
ENSECRP00000009977
annotation not available
   
 0.804
kazn
Kazrin, periplakin interacting protein.
 
 
 0.760
ENSECRP00000016173
annotation not available
   
0.752
ENSECRP00000016248
annotation not available
   
 0.752
ptprd
Protein tyrosine phosphatase receptor type D.
     
 0.536
ptprf
Protein tyrosine phosphatase receptor type F.
     
 0.536
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.