STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cct5Chaperonin containing TCP1 subunit 5. (530 aa)    
Predicted Functional Partners:
cct3
Chaperonin containing TCP1 subunit 3.
  
0.999
cct7
Chaperonin containing TCP1 subunit 7.
  
0.999
cct6a
Chaperonin containing TCP1 subunit 6A.
   
0.999
tcp1
T-complex 1.
  
0.999
LOC114669332
T-complex protein 1 subunit beta-like.
   
0.999
cct4
Chaperonin containing TCP1 subunit 4.
  
0.999
LOC114641935
T-complex protein 1 subunit theta-like.
   
0.999
ermard
ER membrane associated RNA degradation.
   
 0.998
mkks
McKusick-Kaufman syndrome.
   
 0.998
fam161a
FAM161 centrosomal protein A.
 
 
 0.998
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.