STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000007204annotation not available (452 aa)    
Predicted Functional Partners:
cdc42
Cell division cycle 42.
   
 0.749
pdxk
Pyridoxal kinase.
     
 0.701
LOC114658015
Cell division control protein 42 homolog.
   
 0.688
pnpo
Pyridoxamine 5'-phosphate oxidase.
     
  0.686
LOC114659682
Rho-related GTP-binding protein RhoF-like.
    
 0.678
rhof
Ras homolog family member F, filopodia associated.
    
 0.678
rhov
Ras homolog family member V.
   
 0.651
rap1gap2
RAP1 GTPase activating protein 2.
      
 0.648
ENSECRP00000023353
annotation not available
    
 0.627
myo9a
Myosin IXA.
    
 0.627
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.