STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
far1Fatty acyl-CoA reductase 1. (559 aa)    
Predicted Functional Partners:
LOC114648632
Dihydroxyacetone phosphate acyltransferase-like.
 
    
 0.768
LOC114653154
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsD-like.
  
 
 0.758
LOC114653807
Reducing polyketide synthase PKS1-like.
  
 
 0.758
LOC114653155
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsD-like.
  
 
 0.758
fasn
Fatty acid synthase.
  
 
 0.758
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.713
acox1
acyl-CoA oxidase 1.
    
 0.626
ENSECRP00000002094
annotation not available
 
    
 0.596
acox3
acyl-CoA oxidase 3, pristanoyl.
    
 0.594
acadm
acyl-CoA dehydrogenase medium chain.
   
 0.588
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.