STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000007409annotation not available (92 aa)    
Predicted Functional Partners:
hspd1
Heat shock protein family D (Hsp60) member 1.
  
 0.994
grpel1
GrpE like 1, mitochondrial.
  
 
 0.930
grpel2
GrpE like 2, mitochondrial.
  
 
 0.921
clpb
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.883
tcp1
T-complex 1.
  
 0.877
cct3
Chaperonin containing TCP1 subunit 3.
  
 0.863
bbs10
Bardet-Biedl syndrome 10.
  
 0.863
ermard
ER membrane associated RNA degradation.
  
 0.863
cct7
Chaperonin containing TCP1 subunit 7.
  
 0.863
cct5
Chaperonin containing TCP1 subunit 5.
  
 0.863
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.