STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pacsin3Protein kinase C and casein kinase substrate in neurons 3. (477 aa)    
Predicted Functional Partners:
gas7
Growth arrest specific 7.
    
 0.537
sgip1
SH3GL interacting endocytic adaptor 1.
     
 0.488
ENSECRP00000019831
annotation not available
     
 0.488
ENSECRP00000019879
annotation not available
     
 0.488
fcho2
FCH and mu domain containing endocytic adaptor 2.
     
 0.488
pstpip1
Proline-serine-threonine phosphatase interacting protein 1.
     
0.443
htt
Huntingtin.
    
 
 0.439
pstpip2
Proline-serine-threonine phosphatase interacting protein 2.
     
 0.434
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.