STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000007500annotation not available (200 aa)    
Predicted Functional Partners:
tjp1
Tight junction protein 1.
   
 0.809
tjp3
Tight junction protein 3.
   
 0.793
LOC114646713
Claudin-1-like.
  
0.749
cldn7
Claudin 7.
  
0.737
cldn5
Claudin 5.
  
 
0.736
ocln
Occludin.
    
 0.736
cldn19
Claudin 19.
   
0.727
ENSECRP00000016081
annotation not available
  
 
 
0.690
cldn11
Claudin 11.
     
0.684
LOC114655687
Claudin-4-like.
  
  
0.684
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.