STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114653473Cadherin-10-like. (788 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta 1.
    
 0.846
jup
Junction plakoglobin.
    
 0.837
cdh18
Cadherin 18.
  
0.808
LOC114653479
Cadherin-20-like.
  
  
0.777
ENSECRP00000012815
annotation not available
   
 
 
0.775
cdh5
Cadherin 5.
  
  
 
0.768
cdh13
Cadherin 13.
     
0.762
cdh17
Cadherin 17.
     
0.759
ENSECRP00000006376
annotation not available
  
  
0.741
ENSECRP00000006392
annotation not available
  
  
0.741
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.