STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114653046Kinesin-like protein KIF20A. (582 aa)    
Predicted Functional Partners:
racgap1
Rac GTPase activating protein 1.
   
 0.943
LOC114655467
Rac GTPase-activating protein 1-like.
   
 0.943
ENSECRP00000006522
annotation not available
   
0.942
kif11
Kinesin family member 11.
   
0.908
LOC114667207
Kinesin-like protein KIF23.
   
0.872
kif21a
Kinesin family member 21A.
   
0.858
kif18a
Kinesin family member 18A.
   
0.857
kif17
Kinesin family member 17.
   
0.852
plk2
Polo like kinase 2.
   
 0.845
plk3
Polo like kinase 3.
   
 0.845
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.